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what does the other 2% actually look like

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Been reading COAs for a few months and something keeps bugging me. Everyone treats the HPLC number like pass/fail. 98 and up good, under 95 bad. Almost nobody looks at what the remainder actually is.

At work we never get one number back for a water sample. Every contaminant gets its own result against its own limit, because a sample can look clean overall and still fail on lead alone. Total purity on its own would get you laughed out of a compliance review.

So is there a standard list of what shows up in that 2% for synthetic peptides? Truncated sequences, oxidation, that kind of thing? And does it matter if it's one big peak or a bunch of small ones. Seems like it should.

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Good question. I think this is something that gets overlooked quite a bit.

That other 2% of the detected HPLC peak area could be a mix of truncated peptide sequences, oxidation products, or other impurities from the manufacturing process.

What's interesting is that 98% HPLC purity doesn't necessarily mean 98% of the sample is pure peptide by weight. It's generally based on the detected peak areas, so it doesn't always tell the whole story.

HPLC alone also can't necessarily tell you exactly what those other peaks are. Additional testing like LC-MS can help with that.

I'd personally like to see more detailed impurity information on COAs. It's one thing to see a high purity percentage, but I'd be just as interested in knowing what makes up the rest.

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Replying to the threadwhat does the other 2% actually look like · started by @alexm89
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